[HTML][HTML] Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing
…, DR MacFadden, T Charalampous, RS Lee… - Nature …, 2020 - nature.com
Surveillance of drug-resistant bacteria is essential for healthcare providers to deliver
effective empirical antibiotic therapy. However, traditional molecular epidemiology does not …
effective empirical antibiotic therapy. However, traditional molecular epidemiology does not …
Population genomics of Mycobacterium tuberculosis in the Inuit
RS Lee, N Radomski, JF Proulx… - Proceedings of the …, 2015 - National Acad Sciences
Nunavik, Québec suffers from epidemic tuberculosis (TB), with an incidence 50-fold higher
than the Canadian average. Molecular studies in this region have documented limited …
than the Canadian average. Molecular studies in this region have documented limited …
Genomic epidemiology and antimicrobial resistance of Neisseria gonorrhoeae in New Zealand
Background Antimicrobial-resistant Neisseria gonorrhoeae is a major threat to public health.
No studies to date have examined the genomic epidemiology of gonorrhoea in the Western …
No studies to date have examined the genomic epidemiology of gonorrhoea in the Western …
Reemergence and amplification of tuberculosis in the Canadian arctic
RS Lee, N Radomski, JF Proulx, J Manry… - The Journal of …, 2015 - academic.oup.com
Background. Between November 2011 and November 2012, a Canadian village of 933
persons had 50 culture-positive cases of tuberculosis, with 49 sharing the same genotype. …
persons had 50 culture-positive cases of tuberculosis, with 49 sharing the same genotype. …
Previously undetected super-spreading of Mycobacterium tuberculosis revealed by deep sequencing
Tuberculosis disproportionately affects the Canadian Inuit. To address this, it is imperative
we understand transmission dynamics in this population. We investigate whether ‘deep’ …
we understand transmission dynamics in this population. We investigate whether ‘deep’ …
Real-time sequencing of Mycobacterium tuberculosis: are we there yet?
Whole-genome sequencing has taken a leading role in epidemiologic studies of tuberculosis,
but thus far, its real-time clinical utility has been low, in part because of the requirement for …
but thus far, its real-time clinical utility has been low, in part because of the requirement for …
Chapter 1: Epidemiology of tuberculosis in Canada
A Mounchili, R Perera, RS Lee, H Njoo… - Canadian Journal of …, 2022 - Taylor & Francis
• The overall incidence rate of active tuberculosis (TB) disease in Canada is low and has
remained unchanged in the last 10 years at around 4.6-5.1 individuals per 100,000 population, …
remained unchanged in the last 10 years at around 4.6-5.1 individuals per 100,000 population, …
Inadequate Diet Is Associated with Acquiring Mycobacterium tuberculosis Infection in an Inuit Community. A Case–Control Study
Background: Tuberculosis predominantly affects socioeconomically disadvantaged
communities. The extent to which specific dietary and lifestyle factors contribute to tuberculosis …
communities. The extent to which specific dietary and lifestyle factors contribute to tuberculosis …
The implications of whole-genome sequencing in the control of tuberculosis
The availability of whole-genome sequencing (WGS) as a tool for the diagnosis and clinical
management of tuberculosis (TB) offers considerable promise in the fight against this …
management of tuberculosis (TB) offers considerable promise in the fight against this …
The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study
RS Lee, A Gonçalves da Silva… - Journal of …, 2018 - academic.oup.com
Background Vancomycin-resistant Enterococcus faecium (VREfm) represent a major source
of nosocomial infection worldwide. In Australia, there has been a recent concerning …
of nosocomial infection worldwide. In Australia, there has been a recent concerning …